View a breakdown of bioremediation strategies, divided into onsite and offsite options

Comparing bioremediation with other treatment techniques, at three levels of complexity

Physical manipulation, such as collecting and moving contaminated material to a landfill, or chemical applications, which use strong, expensive substances and produce harmful byproducts, can be costly. While bioremediation leverages naturally occurring degradation processes that can be augmented without disrupting impacted ecosystems, these processes may be less effective in environments that bioremediation organisms are not adapted to.

An overview of bioremediation, which can help clean up oil spills, mining waste, and some plastics

The umbrella term refers to a variety of techniques that use organisms to remove harmful substances from an environment or break them down into nontoxic compounds. Because the availability of certain resources can limit the growth of these organisms and impair bioremediation efforts, nutrients such as fertilizers can be deployed to accelerate cleanup.

Learn how environmental conditions are optimized to increase bioremediation efficacy

Through biostimulation, Indigenous microbes are provided with moisture, nutrients, or oxygen to prevent their death and ensure optimal progression of their biochemical reactions. Bioaugmentation can introduce new microbial cultures to target specific compounds not natively found in the environment, while landfarming can spread or aerate contaminated soil to improve access to contaminants.

How the US Department of Energy facilitated bioremediation with emulsified soybean oil

At sites where soil and groundwater were identified as contaminated with volatile organic compounds, scientists and engineers at the Office of Legacy Management used microbes to safely clean them up without more invasive methods, such as pump-and-treat. Treatment zones created at one location by injecting oil to help microbes spread quickly.

The risks of bioremediation, from intermediate products to ecological disruption

A step in the series of complex biochemical reactions involved in the implemented bioremediation process may produce dangerous molecules—sometimes more toxic than the initial pollutants—that require ongoing monitoring to ensure optimal conditions for processing these intermediates toward the eventual, safe outputs. Introducing non-native nutrients or species, including GMOs, may alter existing food webs and gene pools.

Learn about historical uses of bioremediation, the oldest cleanup method on Earth

Biochemical reactions that decompose complex molecules into simpler ones have occurred on Earth for as long as life has existed and have gradually transformed the planet into a celestial body that is increasingly habitable to greater biodiversity. Along the way, modern, human-made bioremediation techniques began to take shape in Santa Maria, California, in the 1960s.

Analyzing brownfield cleanup to explain why bioremediation aligns with environmental justice

This designation applies to sites contaminated by industrial or commercial activity and that are either underutilized or abandoned. Common in economically disadvantaged communities of color, brownfields pose risks to human health and can be costly to restore. Bioremediation can be a more affordable solution that creates in-demand employment pathways in environmental science, regenerative agriculture, and ecological restoration for community members.

Why bacterial bioremediation may help counter the negative effects of past chemical solutions

Molecules such as DDT, a synthetic insecticide, and PFAS—"forever" chemicals used to make products resistant to heat, water, and grease—have historically been used across various industries but are now known to be harmful. Microbes that can convert some of these substances into nontoxic products, such as water and carbon dioxide, have already been identified, with ongoing research to find others.

The cleanup of oil and other chemical spills involves a combination of methods tailored to different settings, including vacuuming, dispersing absorbent materials, chemicals, or biological agents, and localized burning.

The adaptations of metallophiles and how they can be harnessed for bioremediation

These extremophiles have adapted to biomes with very high concentrations of metals and toxic chemicals by developing mechanisms to isolate these substances within cellular compartments and break them down into less harmful forms with specialized proteins. They have the potential to support the decontamination of metal-rich wastewater and soil, as well as the extraction of rare-earth metals.

Examining the potential of the emerging field of insect-based bioremediation

Also known as entomoremediation, the novel approach uses larvae and adult insects, including their gut microbiomes and associated enzymes, to extract or degrade pollutants. As of 2025, research has shown that black soldier flies can degrade a wide range of antibiotics, highlighting their potential for bioremediating antibiotic-contaminated organic waste.

How microbes limited the damage and helped clean up the Deepwater Horizon oil spill

A bloom estimated to contain about 100 sextillion microbial cells broke down much of the 4.1 million barrels of spilled crude oil into nontoxic compounds in what was one of the most significant bioremediations of a human-made disaster. The microbes involved acted similarly to the first patented genetically modified organism in US history: an oil-eating bacterium engineered in 1971.

Watch students comically portray how plants can detoxify the environment

Through a series of processes that collectively make up phytoremediation, plants can take up pollutants from soil and water through their roots, then break them down, release them as less harmful gases, or store them within their cells. Any plants that sequester heavy metals or other toxins must be removed and managed after the environment is decontaminated.

A visualization of mycoremediation, where fungi extract toxic and radioactive pollutants from soil

As organisms such as mushrooms grow, they develop large networks of root-like structures called mycelium that spread underground and release enzymes that break down contaminants. By absorbing these chemicals, fungi limit the damage caused by these toxins and localize them within the organism for easier collection and disposal.

Explore how close you live to some of the most contaminated places in the US

Known as Superfund sites, these toxic locations undergo long-term cleanup to remove hazardous waste, protect health, and restore land for safe reuse. As of 2025, the EPA lists around 1,300 active Superfund sites on its National Priorities List, with more than 450 cleaned and removed since 1980.

Explore a timeline of Brownfields and land revitalization programs

Brownfields are properties where redevelopment is complicated by contamination from past industrial or commercial use. The EPA's Brownfields Program funds cleanup and reuse of these sites, transforming abandoned lots into housing, parks, and businesses while boosting local economies.

Learn about unconventional ways to clean up crude oil, including using moss and chickens

Studies show that microorganisms in chicken manure can break down the hydrocarbons in crude oil without producing toxic by-products. Scientists have also explored avoiding the environmental risks of chemical dispersants and synthetic adsorbents by using human hair and peat moss to adsorb crude oil, which can be taken up by their cuticles and porous structures, respectively.

Greenhouse gas removal consists of a series of techniques to capture and store GHGs

These include turning biomass into charcoal for storage in soil before it decays and releases carbon dioxide, crushing CO₂-absorbing rocks—increasing exposed surface area—and spreading them across land to accelerate GHG uptake, and restoring degraded peatlands, which can store twice the amount of carbon as the average forest.

The most effective method of managing invasive species is prevention education

Controlling a spread after a species has become established in an area is much more costly and time-consuming than early detection and rapid response. Control methods include the purposeful introduction of predators, the use of pesticides, herbicides, fungicides, and insecticides, and physical collection and removal.

Biological terraforming studies have been conducted at Biosphere 2

The experiments involve populating barren hillslopes within the Landscape Evolution Observatory with microbes that react with air and rock to produce molecules needed by more complex organisms. Mosses and other simple plants can then grow in these spaces, gradually making them more hospitable to humans.

The use of fungi to detoxify land and water—a process known as mycoremediation—has been used to clean up natural resources affected by the 2025 California wildfires.

Most biodegradable plastics don’t break down in everyday conditions

Despite their eco-friendly name, biodegradable plastics often require industrial composting, which most areas lack, to decompose the uncommon compounds found in them. This means they may linger in landfills or contaminate conventional plastics in recycling bins.

Microbial research suggests shifts in diverse populations may help an invasive species establish itself

In 1958, English ecologist Charles Elton suggested that diverse ecosystems should be more resistant to invasive species because gaining a foothold would be more challenging when resources are more thinly spread. However, in lab-grown microbial ecosystems with greater biodiversity, population volatility opened more ecological roles that invasive species could easily fill.

Research studies can be conducted inside or outside of living samples

While "in vitro" experiments occur outside living organisms for cost-effectiveness, "in vivo" experiments take place inside them, providing real-life insights at a higher cost and with increased ethical concerns. Alternatively, "in silico" methods use computational simulations.

Most plastics are not biodegradable because breaking their chemical bonds requires temperatures lethal to most microbes, and these organisms have not been exposed to plastic long enough to evolve the necessary enzymes.

Modern landfills use layered liners, leachate systems, and gas monitors to safely contain waste

Today, landfill engineering is far more complex than a hole in the ground, which was largely the system cities used less than a century ago. This video explains how it actually works.

How scientists are using molecules found in acidophiles to develop new medical treatments

The Berkeley Pit, an open-pit copper mine in Butte, Montana, that ceased operations in 1982 and is now filled with highly acidic water, is home to various species of fungi and yeast. These extremophiles produce unique compounds that may have anti-inflammatory benefits and have already been used to create an antibiotic for staph infections.

View the industrial applications of extremozymes, from food safety to antibiotic production

Extremophiles possess unique enzymes and organic molecules that have enabled them to adapt to and thrive in otherwise lethal environments. Because these conditions resemble those found in various areas of manufacturing and production plants, these organisms and their macromolecules can optimize industrial processes where conventional catalysts would lose their ability to speed up reactions.

Alkaline hydrolysis—dissolving the body—is one 'green' burial option

This approach, which is sometimes called flameless cremation, involves dissolving the body with water and chemicals. The remaining bone fragments can then be spread like ashes. It was reportedly incorporated into the funeral industry in 2011.

View the steps you can take to stop invasive species

Individuals who are outside should make sure to wash any outdoor gear and equipment with appropriate tools to limit the spread of seeds and other microorganism-carrying debris across locations. Pets, horses, and other animals should be similarly brushed, and firewood should be burned where it is purchased.

Explaining deep-sea mining, including its economic benefits and potential biomedical risks

Extraction via machines sweeping the ocean floor would reduce child labor and human rights violations currently occurring in land-based operations that collect the minerals needed for modern-day electronics. However, these sweeps may kill undiscovered organisms that possess biologies from which antibiotics could be derived and destabilize deep-sea ecosystems.

Why extremophiles may play an important role in terraforming Mars

Possessing unique biochemicals that can detoxify extreme environments and resilience against the Martian surface that is lethal to humans, scientists are exploring whether colonies of these organisms can transform small areas of the Red Planet into future habitats for humans. Extremophiles may also be best equipped to serve as microscopic factories for the fabrication of essential polymers.

Agrivoltaic solutions are tested in the land around the Biosphere 2 complex

The experiments involve identifying conditions needed to grow plants beneath solar panels, which protect the plants from the harsh sunlight of the Arizona desert. Research includes a citizen science component, where satellite gardens have been installed in nearby high schools.

See examples of hyperaccumulators, the plants that can harvest heavy metals

These ideal species for phytoremediation possess biochemistry that allows them to absorb and store these elements without being poisoned by their accumulation. Pycnandra acuminata, one such plant, has blue-green sap due to an abundance of nickel, which it captures from the nickel-rich soil in which it grows.

Explore options for recycling batteries

Improper battery disposal can lead to fires and the leaching of harmful chemicals and toxic materials into local soil and water systems. Although many batteries contain metals that can be recycled with less energy than it takes to produce them, variability in regulations across municipalities and states can complicate efforts. (Some readers may experience a paywall.)

Rare earth elements may be extracted from mine waste and coal ash

Rather than focusing solely on new mining operations, which can take decades to establish, some startups are developing methods to extract these metals from the toxic waste of existing operations and thereby minimize environmental impacts. (Some readers may experience a paywall.)

Some algae have helped remove microplastics from water after being bioengineered to clump together with these contaminants, forming an easily collectible microplastic-algae sludge.

B2 models the interactions of air, water, soil, plants and microbes at the LEO

The Landscape Evolution Observatory at Biosphere 2 examines how factors such as climate change, water flow, weathering and community development impact landscape structures comprising 500 metric tons of crushed rock. Research is also conducted at biomes representing savannas, mangroves, coastal fog deserts, oceans and rainforests.

Environmental DNA monitoring can help detect the presence of invasive species

Genetic material that organisms deposit into water, soil, or air can be identified by analyzing samples from each environment, allowing land managers to more reliably detect and track organisms than visual surveys alone. eDNA has been used to develop early warning surveillance systems for various invasive marine species.

Fecal transplants can help treat infections by transplanting healthy gut bacteria from a donor into a patient's gastrointestinal tract using samples of human waste, which are turned into a liquid mixture and often delivered via a colonoscopy procedure.

Growing EV adoption requires battery management infrastructure

Despite rechargeable batteries' limited life cycle, companies like Spiers New Technologies have developed methods to repair, refurbish, repurpose and recycle these components to minimize environmental waste, lower demand for new critical minerals, and increase electric vehicle lifetimes.

'Human composting' is an eco-friendly burial method legal in only a few states

Formally known as natural human organ reduction, this process relies on the same principles as standard composting and breaks down the body over many weeks, turning it into a type of soil. It's currently only legal in a handful of states.

Decommissioned oil rigs have been repurposed into artificial reefs that serve as nursery habitats for fish, corals, sponges, and other invertebrates in the decades since their installation.

An overview of extremophiles and the biochemical adaptations employed by various types

These organisms thrive in environments that would normally be inhospitable to most living things by using molecules that help counter deadly environmental factors. These include antifreeze-like proteins that prevent psychrophiles from freezing and rupturing in polar regions, and osmoprotectants that prevent some extremophiles from losing water to salty environments.

A guide to crude oil and natural gas extraction, from rig site preparation to land restoration

Requirements for traffic plans, access roads, and noise barriers vary by state and local laws, but once the rig site is prepared, the rig is assembled and digs a well that is then encased in steel and cement to protect groundwater reservoirs. After drilling and testing the extraction pipe, fracking fluid is injected into the rock to create cracks where crude oil resides, allowing it to be pumped out.

Landfills capture methane gas and convert it into usable energy

As organic waste breaks down underground, it produces landfill gas that is roughly 50% methane. That gas can be captured and used to generate electricity or provide heat for nearby homes and businesses.

Watch how deep-sea mining equipment collects and processes polymetallic nodules—metal-rich, potato-shaped rocks—from the ocean floor and creates environmentally damaging plumes of sediments.

Technologies developed for the ISS have brought benefits to people on Earth

About 93% of water used onboard the International Space Station is recycled through filtration and purification systems that have since been used in regions lacking access to clean water. Treatments to mitigate bone loss and muscle atrophy in astronauts can also help aging adults.

As an experiment, the first B2 mission highlighted the challenges of isolated systems

Some argue that isolation from the outside world was compromised—making the experiment a failure—when a crew member was taken from Biosphere 2 for surgery and returned hours later. This position was strengthened when it was revealed that oxygen had been pumped into the facility.

Despite privacy risks, scientists are using DNA in the air to assess ecosystem health

While DNA in soil and water samples has long been used for such analyses, airborne DNA is being incorporated into such efforts to monitor individual species abundance, detect invasive species, measure biodiversity, and determine the success of conservation actions. Future work may include detecting attacks from biological weapons.